Start section on automatic data acquisition process
We need to start designing the automatic data acquisition process. I'm in favor of quickly merging it in main
and mark section as [WIP]. Otherwise we'd need to work on a separate branch until the process is implemented.
To close this issue we must include the following data acquisition steps with descriptions, artifacts, and available resources. The details will be delegated to separate issues and MRs.
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starting a study (register with a survey, create project from template) -
scanning (sequences, naming using reproin, DICOMs) -
presentation log files -
collecting and archiving the artifacts -
user-defined study configuration file for artifacts validation and feedback -
BIDS conversion (MRI, events) -
anonymization using BIDSonym and our custom configuration -
BIDS validation -
data injection into a repository with MR -
user review and acceptance of new data -
ensure that interrupted sessions are handled correctly (duplicated fieldmaps, duplicated fmri scans) see #14 (closed)
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Edited by Mateusz Pawlik